In a world where the survival of humanity depends on the controversial practice of meat conversion, Algorithms of Shadows follows the story of Dr. Marc Minski, Head of Research at the Population Sustainability Institute. Under the watchful eye of the Ministry of Sustainability, this renowned research center is responsible for training specialists in the process of converting selected individuals into resources for the greater good.

As Marc leads his latest cohort through the rigorous program, he grapples with the moral and emotional implications of reducing human life to mere components in a system driven by survival. His star student, Dr. Ella Tatoni-Ahua, has a clinical approach that clashes with Marc's growing doubts about their work. As they navigate ethical challenges and encounter those affected by meat conversion, their perspectives come into conflict.

The novel also delves into the lives and experiences of those selected for conversion, exploring their thoughts and fears as they face their terrifying fate. Their stories provide a stark contrast to the detached operations of the Institute, shedding light on the human cost of prioritizing sustainability over morality.

As Marc uncovers unsettling truths about AI control in the system, he questions everything he has dedicated his life to. Is this really for the greater good, or has technology warped their society's values?